13563 Homez Status: ES cell colonies screened / QC no positives
Gene | Homez |
Chromosome | 14 |
Deletion Start | 54,858,246 |
Deletion End | 54,856,599 |
Deletion Size | 1,648 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 14
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 54,857,998 | 54,858,017 | GGTTCATGGCCCAACGTCTC |
TUP | 54,857,975 | 54,857,997 | CGCTGCGGCATTAGCTGGTCATC |
TUR | 54,857,949 | 54,857,968 | TGGCACGAGTCTCCTCTATC |
TDF | 54,856,855 | 54,856,874 | GCACTCAGCAAGTGTTGGAC |
TDP | 54,856,828 | 54,856,854 | TGGTTTGACTCTCGATTGCCTAAGCCA |
TDR | 54,856,768 | 54,856,788 | TGGCAGTTCATCCTCCTCATC |
PCR Primers
Primer | Sequence |
SU | GGAACAGTAAAGGCTGTGGG |
SD | TAGCTGCAGTGTGCCTGAAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 69 bp | + | + | - |
TDF | TDR | 107 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |