13581   Ier3     Status: ES cell colonies screened / QC one positive

GeneIer3
Chromosome17
Deletion Start35,821,722
Deletion End35,822,367
Deletion Size646
Genome Build38
MGI IDMGI:104814
NCBI Gene ID15937
BAC ID204I9
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 17

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF35,821,94235,821,960GAGTGGGCATCAGGAGGTC
TUP35,821,96235,821,987CGTCGCCCTGGAACTTGTAGGTAACA
TUR35,822,00235,822,023GAGGGAAACGTCAGATCGAAGG
TDF35,822,22635,822,244CGAGCCTTTGAACCTGACC
TDP35,822,24635,822,268CGGAGTCCTCGGACTATGCGCTG
TDR35,822,30435,822,324GTGACCCATCGCGTTTAGAAG

PCR Primers

PrimerSequence
SUTTCACTAAGGAGGGTGGCTG
SDCCCTGAGAAGCAACCAGAAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR82 bp++-
TDFTDR99 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13581A-B9VGB6C57BL/6NTac