13667   Ngrn     Status: ES cell colonies screened / QC positives

GeneNgrn
Chromosome7
Deletion Start80,261,849
Deletion End80,265,086
Deletion Size3,238
Genome Build38
MGI IDMGI:1933212
NCBI Gene ID83485
BAC ID267B19
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 7

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF80,262,20680,262,228ACCTCCAGGACACTGTAGACAAG
TUP80,262,23680,262,262TTGAACTCTTGTCTTCCTGCCTCTGCC
TUR80,262,29080,262,310TCCAGGAGCGTTGGTACATAC
TDF80,264,77380,264,792CCACAGCCTTGGGTCATCAG
TDP80,264,79380,264,817CGAGAGCTTCAGAAATCCGCCACCA
TDR80,264,84880,264,870CACAGCACTTGGTAACGTATCAC

PCR Primers

PrimerSequence
SUCTTCTCATCCGTTGTCTAGG
SDCTGCCGAGAAGAGAACCAAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR105 bp++-
TDFTDR98 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13667A-F3VGB6C57BL/6NTac
13667A-F6VGB6C57BL/6NTac