13810   Sap18     Status: ES cell colonies screened / QC positives

GeneSap18
Chromosome14
Deletion Start57,798,286
Deletion End57,802,147
Deletion Size3,862
Genome Build38
MGI IDMGI:1277978
NCBI Gene ID20220
BAC ID176J9
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 14

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF57,798,92757,798,945GGTGTCAAAGCGTTTGGTG
TUP57,798,95557,798,977TGAGGACGGCTGTCCCAAGTGTT
TUR57,798,97957,798,999CAAGGCAGGTACTCGGAGATG
TDF57,801,32557,801,344GACACAGGTTGCCAGGATTG
TDP57,801,34857,801,372AGCAAACTGACTTCCCTGCCAGGCC
TDR57,801,38057,801,402CCAGTGCTGCACACTATATGATG

PCR Primers

PrimerSequence
SUTACGTTAAGCTGACCTGGGC
SDTGCCACAAACATATTCACCAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR73 bp++-
TDFTDR78 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13810A-B12VGB6C57BL/6NTac
13810A-A1VGB6C57BL/6NTac
13810A-F7VGB6C57BL/6NTac
13810A-E10VGB6C57BL/6NTac
13810A-E4VGB6C57BL/6NTac
13810A-D3VGB6C57BL/6NTac