13855 Rdbp Status: ES cell colonies screened / QC no positives
Gene | Rdbp |
Chromosome | 17 |
Deletion Start | 34,856,162 |
Deletion End | 34,850,922 |
Deletion Size | 5,241 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 17
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 34,851,198 | 34,851,217 | CCACCCAGAGCCTTGTGAAC |
TUP | 34,851,220 | 34,851,247 | TCAAATGCCCAAGTAAATGTGCTCCTCC |
TUR | 34,851,249 | 34,851,270 | AAGGGAGGGAGGTAGAGCAGAC |
TDF | 34,855,324 | 34,855,344 | GCCTCTGAGCTGGAGTGTTAC |
TDP | 34,855,346 | 34,855,371 | TGAACTTGGTATTGTGGGTCTGGACC |
TDR | 34,855,379 | 34,855,399 | ATGTTTCCATGCCTGGTCTTC |
PCR Primers
Primer | Sequence |
SU | TCCTCTGGTTGCCCAGATAG |
SD | CCACATCAACCTCTTCCAGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 73 bp | + | + | - |
TDF | TDR | 76 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |