13856 Sox12 Status: ES cell colonies screened / QC no positives
Gene | Sox12 |
Chromosome | 2 |
Deletion Start | 152,397,695 |
Deletion End | 152,396,727 |
Deletion Size | 969 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 152,397,429 | 152,397,448 | CGGAGAAGATCCCGTTCGTG |
TUP | 152,397,399 | 152,397,418 | AGCGGCTGCGCCTCAAGCAC |
TUR | 152,397,371 | 152,397,392 | GGTACTTGTAGTCCGGGTAGTC |
TDF | 152,396,808 | 152,396,826 | CCCCGAGGTTACCGAGATG |
TDP | 152,396,773 | 152,396,796 | CTGGCGCTCGTCTAGTATCGCCGA |
TDR | 152,396,747 | 152,396,768 | GGTGGGCTCAGTAGGTGAAAAC |
PCR Primers
Primer | Sequence |
SU | GAGAAAGACACTGGAAGGC |
SD | TAACTACCAAGGCAGGCCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 78 bp | + | + | - |
TDF | TDR | 80 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |