13919   Trp53i13     Status: ES cell colonies screened / QC positives

GeneTrp53i13
Chromosome11
Deletion Start77,513,228
Deletion End77,508,178
Deletion Size5,051
Genome Build38
MGI IDMGI:1915125
NCBI Gene ID216964
BAC ID262G3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF77,512,80877,512,829CGATTGGGACATCTGTGGTTTC
TUP77,512,78677,512,807TCCTGCCCTCAGTCTCCAGCGT
TUR77,512,72477,512,743GGGACTTCGTGTTGGGTGTG
TDF77,508,96777,508,987CGACTCTGGCCTTTGCTCTAC
TDP77,508,94377,508,964AGCTGGCGACCTCCTGGTGCAC
TDR77,508,89577,508,917TCTTCACAACACTGATCGAGGAC

PCR Primers

PrimerSequence
SUCTACTCAGGCGATACAGTTG
SDTTGGTTCAGGTCATTGTTGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR106 bp++-
TDFTDR93 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13919B-A2VGB6C57BL/6NTac
13919B-B7VGB6C57BL/6NTac
13919B-C7VGB6C57BL/6NTac
13919B-E5VGB6C57BL/6NTac
13919B-F1VGB6C57BL/6NTac