13925   Tspan1     Status: ES cell clone microinjected

GeneTspan1
Chromosome4
Deletion Start116,167,061
Deletion End116,162,885
Deletion Size4,177
Genome Build38
MGI IDMGI:1914055
NCBI Gene ID66805
BAC ID332L17
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 4

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF116,166,932116,166,950AACAGAGGCCAGGCTGGAG
TUP116,166,903116,166,929TGGGAAACTAGGTACCCAGACTCTGCC
TUR116,166,845116,166,868TCAGGAATCAGCATTTGGGAAGAC
TDF116,163,372116,163,395CCAAGGGTTGTTTCAAAGAGATTC
TDP116,163,339116,163,366AGAATCAGAGCCAATGCAGTCACTGTGG
TDR116,163,317116,163,335GCAACTCCAACTGCCACAC

PCR Primers

PrimerSequence
SUGCAGTTTCCTGGAGCTGTTC
SDTTAGGCAATCAGGACCCATC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR106 bp++-
TDFTDR79 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13925A-A10VGB6C57BL/6NTac
13925A-B10VGB6C57BL/6NTac
13925A-C8VGB6C57BL/6NTac
13925A-F7VGB6C57BL/6NTac
13925A-F5VGB6C57BL/6NTac
13925A-D2VGB6C57BL/6NTac