13946   Yipf2     Status: ES cell colonies screened / QC positives

GeneYipf2
Chromosome9
Deletion Start21,592,555
Deletion End21,589,643
Deletion Size2,913
Genome Build38
MGI IDMGI:1922016
NCBI Gene ID74766
BAC ID387K20
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 9

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF21,592,14521,592,164GCCAAAGTGATGAGCTGACC
TUP21,592,12521,592,144TCCCGAGAGCACGTGGCTGT
TUR21,592,10421,592,123CCAATGCCTGAACCCACAAC
TDF21,589,88621,589,905GCTGCGGCACTATTGTCTAC
TDP21,589,86521,589,885TGTGGTGCTGCTTCACGCCCT
TDR21,589,81421,589,832CACAGCCCTGGTGAGAATC

PCR Primers

PrimerSequence
SUACGGACCTAAACGGATGTTG
SDGGCTCTCTCCTGTCCATCAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR61 bp++-
TDFTDR92 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13946A-D2VGB6C57BL/6NTac
13946A-E11VGB6C57BL/6NTac
13946A-E2VGB6C57BL/6NTac
13946A-E10VGB6C57BL/6NTac
13946A-E7VGB6C57BL/6NTac
13946A-G6VGB6C57BL/6NTac