Gene | Zdhhc12 |
Chromosome | 2 |
Deletion Start | 30,093,585 |
Deletion End | 30,091,159 |
Deletion Size | 2,427 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 30,093,086 | 30,093,109 | CCCAAATCCTATGAGCCGACTAAC |
TUP | 30,093,060 | 30,093,082 | CCCAAGGGACGCCACTATAGCGA |
TUR | 30,093,034 | 30,093,052 | CCAGGCGAAGGTGGGAAAC |
TDF | 30,092,045 | 30,092,063 | CGAGCCCAAGGAGGAACAG |
TDP | 30,092,021 | 30,092,043 | CAGCCATGGTTCCTCAGGCCGTC |
TDR | 30,091,983 | 30,092,002 | CCTACCAGCACCAGACAGTG |
PCR Primers
Primer | Sequence |
SU | ATCAAAGATGGGCACGCATG |
SD | AGCCTCCACGTAACCATGTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 76 bp | + | + | - |
TDF | TDR | 81 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13951A-A2 | VGB6 | C57BL/6NTac | |
13951A-D8 | VGB6 | C57BL/6NTac | |
13951A-H6 | VGB6 | C57BL/6NTac | |
13951A-D11 | VGB6 | C57BL/6NTac | |