Gene | 1110059G10Rik |
Chromosome | 9 |
Deletion Start | 122,950,909 |
Deletion End | 122,946,882 |
Deletion Size | 4,028 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 9
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 122,950,728 | 122,950,745 | TCGGTGCCGACGTAACTG |
TUP | 122,950,706 | 122,950,726 | CAGGTCCCTCACTCGCGACCA |
TUR | 122,950,644 | 122,950,668 | TCAAGAATAGCACCCTGCAAGTAAG |
TDF | 122,947,254 | 122,947,276 | GCTTCTGAAACCTCAAAGCACAC |
TDP | 122,947,224 | 122,947,252 | TCCTCCAGTAAAGCCATATCTCCTAGTCC |
TDR | 122,947,181 | 122,947,202 | ACAGCAGAGGCTCAGGGAGTAG |
PCR Primers
Primer | Sequence |
SU | CGATGAGTTCACCAGGCAG |
SD | CAGTGGAACTGTTTGTTACATG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 102 bp | + | + | - |
TDF | TDR | 96 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14006A-C3 | VGB6 | C57BL/6NTac | |
14006A-D5 | VGB6 | C57BL/6NTac | |
14006A-G9 | VGB6 | C57BL/6NTac | |
14006A-E10 | VGB6 | C57BL/6NTac | |
14006A-G5 | VGB6 | C57BL/6NTac | |
14006A-D8 | VGB6 | C57BL/6NTac | |