Gene | Zfp788 |
Chromosome | 7 |
Deletion Start | 41,647,587 |
Deletion End | 41,650,647 |
Deletion Size | 3,061 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 41,648,249 | 41,648,269 | TCTTCACCAAGACACCAACTC |
TUP | 41,648,270 | 41,648,289 | TGACAAACATCTTCCCTGGT |
TUR | 41,648,305 | 41,648,323 | GCATCCCGCCACTTTCATC |
TDF | 41,650,120 | 41,650,142 | TGCTTACTCCAGACCCATGAAAG |
TDP | 41,650,146 | 41,650,174 | TCACAGTGGTGTGAAACCCTACGAATGTA |
TDR | 41,650,199 | 41,650,220 | TGGACCCGAAAGGAACTATGAC |
PCR Primers
Primer | Sequence |
SU | TGGAAGGACTAGAGATCCATC |
SD | ATTCACAGAATTCCCTTCTAAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 75 bp | + | + | - |
TDF | TDR | 101 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14036B-C5 | VGB6 | C57BL/6NTac | |
14036C-B5 | VGB6 | C57BL/6NTac | |