14044   Spata24     Status: ES cell colonies screened / QC positives

GeneSpata24
Chromosome18
Deletion Start35,662,125
Deletion End35,656,646
Deletion Size5,480
Genome Build38
MGI IDMGI:1918492
NCBI Gene ID71242
BAC ID114M10
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 18

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF35,661,55835,661,576AGTGGGTGCCACGCTAATG
TUP35,661,52935,661,556CGTCATAGTTACATCAGTGCCGGGTCCG
TUR35,661,50835,661,528CACAAAGCCCATGACCTCCAG
TDF35,656,86035,656,877TGTGCAGCCTACGACCAG
TDP35,656,83035,656,858TGGCTCCATTGCAGGAATCACATATCTGA
TDR35,656,75235,656,773CGCATTCCTGTGGCTTTCTTAC

PCR Primers

PrimerSequence
SUTTTGTTGCTGCAGTGTTGGG
SDCAAACCTAACCACCCAAAGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR69 bp++-
TDFTDR126 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
14044A-H10VGB6C57BL/6NTac
14044A-C9VGB6C57BL/6NTac
14044A-D4VGB6C57BL/6NTac
14044A-E6VGB6C57BL/6NTac
14044A-E8VGB6C57BL/6NTac
14044A-D11VGB6C57BL/6NTac