Gene | Zfp940 |
Chromosome | 7 |
Deletion Start | 29,850,947 |
Deletion End | 29,844,703 |
Deletion Size | 6,245 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 29,850,838 | 29,850,862 | CAACTGGTAAGGGATGGTTGTGAAG |
TUP | 29,850,813 | 29,850,835 | CTCTACAGCTGGCGGCCATTGCT |
TUR | 29,850,782 | 29,850,804 | TTGGTGCTTTGTCAGATGGTTAG |
TDF | 29,844,890 | 29,844,914 | GGTCAAAGAGCACATCTTACCAAAC |
TDP | 29,844,858 | 29,844,887 | CAGAGAATTCACACTGGTGAAGAAGGCCCT |
TDR | 29,844,836 | 29,844,857 | TTTCCACGCTCTGACATTCATC |
PCR Primers
Primer | Sequence |
SU | TTCAAAGAAGCCTTAACCTTTC |
SD | TGCAAAGGATGTGGTGAGAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 81 bp | + | + | - |
TDF | TDR | 79 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14061A-H2 | VGB6 | C57BL/6NTac | |
14061C-F9 | VGB6 | C57BL/6NTac | |
14061C-F10 | VGB6 | C57BL/6NTac | |