Gene | Kazald1 |
Chromosome | 19 |
Deletion Start | 45,076,685 |
Deletion End | 45,079,027 |
Deletion Size | 2,343 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 19
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 45,077,372 | 45,077,392 | GCCAGGTTTGAGGTGCCTAAG |
TUP | 45,077,393 | 45,077,417 | AGCTCTATCCAGGCAGGTCCTTGCA |
TUR | 45,077,435 | 45,077,458 | CAGCTATTGGCTATGTGCCTGTTC |
TDF | 45,078,611 | 45,078,632 | AGCTTTGCGCCCTAGTGATGAG |
TDP | 45,078,636 | 45,078,658 | ACCTACCGTTGCCTTGCCCGGAA |
TDR | 45,078,679 | 45,078,700 | AGCACTGTGAGGGTTGCAGAAG |
PCR Primers
Primer | Sequence |
SU | GGTGGTTTCTGGAGGTGATG |
SD | GCCAGAGTCTGTTATGTGCG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 87 bp | + | + | - |
TDF | TDR | 90 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14079A-C11 | VGB6 | C57BL/6NTac | |
14079A-D2 | VGB6 | C57BL/6NTac | |
14079A-C12 | VGB6 | C57BL/6NTac | |