Gene | Sigirr |
Chromosome | 7 |
Deletion Start | 141,094,785 |
Deletion End | 141,091,258 |
Deletion Size | 3,528 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | | | GAGTTCGGCCTCAGAGAAGTAG |
TUP | | | CAGTCTGTGGCCAGTAGATGGGATTCC |
TUR | | | ACAGGGCAAGCCAGAGTC |
TDF | | | GACCTCGGCTCTCGAAACTAC |
TDP | | | TGCACGGACAGACTTCTACTGCCTC |
TDR | | | TGCTGGGATATGGGCTACAC |
PCR Primers
Primer | Sequence |
SU | CCACAGGACATGTGAAGGTG |
SD | TCATACTCCCAACCAGGAGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14087A-C12 | VGB6 | C57BL/6NTac | |
14087A-E6 | VGB6 | C57BL/6NTac | |
14087A-E10 | VGB6 | C57BL/6NTac | |