14114   Ptpn6     Status: ES cell colonies screened / QC positives

GenePtpn6
Chromosome6
Deletion Start124,732,950
Deletion End124,721,031
Deletion Size11,920
Genome Build38
MGI IDMGI:96055
NCBI Gene ID15170
BAC ID436O2
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 6

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF124,732,663124,732,681GGTTCCCTGGGTTGTGTTG
TUP124,732,626124,732,654TGATACATTTCTTCCCTTCTGTCCCTGCC
TUR124,732,579124,732,601AGGCATGGAGTAGACATAGACAG
TDF124,721,640124,721,660AGGGCCAGGAGTCGGAGTATG
TDP124,721,611124,721,635TATCACGTACCCTCCCGCTGTGAGG
TDR124,721,580124,721,600AGGAAGTACGCGAGGCTTTGG

PCR Primers

PrimerSequence
SUTGACTCTTGACCTGCCACAC
SDTTGGAGGCAATACACAGTGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR103 bp++-
TDFTDR81 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
14114A-A9VGB6C57BL/6NTac
14114A-B1VGB6C57BL/6NTac
14114A-C1VGB6C57BL/6NTac
14114A-E9VGB6C57BL/6NTac