14117   Rab11fip1     Status: ES cell colonies screened / QC positives

GeneRab11fip1
Chromosome8
Deletion Start27,174,582
Deletion End27,143,107
Deletion Size31,476
Genome Build38
MGI IDMGI:1923017
NCBI Gene ID75767
BAC ID223C17
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 8

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF27,173,70527,173,724TGCTGATTCTCATGCCCATC
TUP27,173,66727,173,695CCCTCGGAATGAACGCTAGAACAGTTTGT
TUR27,173,63827,173,661CGACCACTAATTCAGATCCCAGAC
TDF27,143,31727,143,339TGATCCAGCTAGTCCTCAAACAG
TDP27,143,28227,143,309CCATCAGCAAGAAGGAGTTTCAGGTGCG
TDR27,143,25327,143,274GCAGGTTGTCGATGTAGTCCTC

PCR Primers

PrimerSequence
SUGGGACCAGAGCAGGAGAAG
SDCAAGAGAGCGGGTGAAACAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR87 bp++-
TDFTDR87 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
14117A-D1VGB6C57BL/6NTac
14117A-E5VGB6C57BL/6NTac
14117A-F11VGB6C57BL/6NTac