Gene | A3galt2 |
Chromosome | 4 |
Deletion Start | 128,759,912 |
Deletion End | 128,767,726 |
Deletion Size | 7,815 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 128,760,567 | 128,760,586 | CAGTGCCCACTCCCTCCAAG |
TUP | 128,760,587 | 128,760,613 | CCAGGTCTTGGGCCTTTGAGCTATGTG |
TUR | 128,760,629 | 128,760,648 | GTGTCAGCCAGTTCCACCAG |
TDF | 128,767,383 | 128,767,405 | CGTTAAGCGAAGGCGATTTCTAC |
TDP | 128,767,406 | 128,767,426 | TACCACGCTGCGGTGTTTGGC |
TDR | 128,767,440 | 128,767,458 | GCCGTCAGCTTGAGCAGTG |
PCR Primers
Primer | Sequence |
SU | AGGCCAAGATAGTTCCCAGG |
SD | ATTGTCAAGGTGTGGGAACC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 82 bp | + | + | - |
TDF | TDR | 76 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14304A-A1 | VGB6 | C57BL/6NTac | |
14304A-D1 | VGB6 | C57BL/6NTac | |
14304A-D3 | VGB6 | C57BL/6NTac | |
14304A-F12 | VGB6 | C57BL/6NTac | |