14309   Cntn1     Status: ES cell colonies screened / QC one positive

GeneCntn1
Chromosome15
Deletion Start92,216,390
Deletion End92,254,130
Deletion Size37,741
Genome Build38
MGI IDMGI:105980
NCBI Gene ID12805
BAC ID370F24
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 15

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF92,216,71692,216,738GACAGCATGGCTTAAATCAACAC
TUP92,216,74692,216,775TGTAGAATCGGGAGAGGTGGTTGGTATTTC
TUR92,216,77992,216,802GGTATCTTCGATTCTAGGCAGGTG
TDF92,253,15792,253,178GCAGTGGACTAGATGGGAGAAC
TDP92,253,18092,253,207TGGAAGGTAAAGGGTATGCCATCACTGG
TDR92,253,20992,253,231CACAGAGTCTCATAGCTGGTCAC

PCR Primers

PrimerSequence
SUAAACCTGGTGATTTGCCATC
SDTCTAGACTGTTTTCAACAATTCAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR87 bp++-
TDFTDR75 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
14309B-G11VGB6C57BL/6NTac