Gene | Polr2a |
Chromosome | 11 |
Deletion Start | 69,758,220 |
Deletion End | 69,734,389 |
Deletion Size | 23,832 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | | | GCCAGGACTTAAACAAGCGAAATG |
TUP | | | ATGCCTGAGATGAGTGCTTGACTGGA |
TUR | | | CTCGTTGAACCGCAGCAATG |
TDF | | | CCAAGGGCTCCACCTACTC |
TDP | | | CACTTCTCCTGGCTACTCACCCACTAGC |
TDR | | | TTCTCCTCATCGCTGTCATCTG |
PCR Primers
Primer | Sequence |
SU | TAACCTCTGCCGTTCAGGAT |
SD | GGTGTATGACCCAGAGCAGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14343A-F12 | VGB6 | C57BL/6NTac | |
14343B-E5 | VGB6 | C57BL/6NTac | |
14343C-A4 | VGB6 | C57BL/6NTac | |
14343C-B5 | VGB6 | C57BL/6NTac | |