14363   Spata7     Status: ES cell colonies screened / QC positives

GeneSpata7
Chromosome12
Deletion Start98,649,510
Deletion End98,669,668
Deletion Size20,159
Genome Build38
MGI IDMGI:2144877
NCBI Gene ID104871
BAC ID293I22
BAC LibraryRPCI 23
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 12

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF98,628,50898,628,530GCCTGTATCACTTGGGTATCTTC
TUP98,628,53298,628,557AGGCGGAATACTAGCCTGGTCTTTGA
TUR98,628,59498,628,611CTGAGCGCCGTTTCTGTG
TDF98,647,94398,647,961TGTTGGCATGGCTTTGCTG
TDP98,647,96498,647,992TTGCTTGCTCATTTGAGCTGAGTTATTGC
TDR98,648,00098,648,019GGCCAGGAGTTCAGGGACAG

PCR Primers

PrimerSequence
SUGCTGGCAGAAGCAGATATGAC
SDCTGTCTCTGGCTAGCGAATG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR104 bp++-
TDFTDR77 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
14363A-E1VGB6C57BL/6NTac
14363A-E3VGB6C57BL/6NTac
14363A-F1VGB6C57BL/6NTac