Gene | 2410066E13Rik |
Chromosome | 6 |
Deletion Start | 54,681,795 |
Deletion End | 54,699,153 |
Deletion Size | 17,359 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 6
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 54,682,532 | 54,682,553 | CCAGGAACTACAGCGACCATAC |
TUP | 54,682,554 | 54,682,575 | CTTTGGCCAGCATCCCTCCCAC |
TUR | 54,682,578 | 54,682,599 | AAACTGTCAGCACCAGAATACC |
TDF | 54,698,257 | 54,698,277 | CACCTGCTGCCAAGTCTGATG |
TDP | 54,698,278 | 54,698,302 | ACCCTAGTTCTGCCTCTGGGCATCA |
TDR | 54,698,328 | 54,698,347 | GGTCACAGGACAATGCACAG |
PCR Primers
Primer | Sequence |
SU | AGAGAAAGCCTTCCAAACTG |
SD | CATGCTTTCTAAGCGAAGCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 68 bp | + | + | - |
TDF | TDR | 91 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14387A-E2 | VGB6 | C57BL/6NTac | |
14387A-C8 | VGB6 | C57BL/6NTac | |