Gene | Jun |
Chromosome | 4 |
Deletion Start | 95,051,268 |
Deletion End | 95,050,211 |
Deletion Size | 1,058 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 95,051,204 | 95,051,223 | TCGTTCCTCCAGTCCGAGAG |
TUP | 95,051,180 | 95,051,203 | CGGTGCCTACGGCTACAGTAACCC |
TUR | 95,051,086 | 95,051,107 | CGTGAGAAGGTCCGAGTTCTTG |
TDF | 95,050,373 | 95,050,391 | ACTCCGAGCTGGCATCCAC |
TDP | 95,050,346 | 95,050,370 | CCAACATGCTCAGGGAACAGGTGGC |
TDR | 95,050,283 | 95,050,302 | TGCTGCGTTAGCATGAGTTG |
PCR Primers
Primer | Sequence |
SU | GAGAATTCCGTGACGACTGG |
SD | TAGCCTGGCACTTACAAGCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 138 bp | + | + | - |
TDF | TDR | 109 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14429A-A9 | VGB6 | C57BL/6NTac | |
14429A-F5 | VGB6 | C57BL/6NTac | |