Gene | Bhlhe23 |
Chromosome | 2 |
Deletion Start | 180,776,740 |
Deletion End | 180,775,997 |
Deletion Size | 744 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 180,776,685 | 180,776,703 | CGCTGAGCCACAGCTACAC |
TUP | 180,776,659 | 180,776,678 | CGGCCACGCCTACGCTGCAG |
TUR | 180,776,616 | 180,776,633 | GGACCCGATGCACCGAAG |
TDF | 180,776,120 | 180,776,139 | CAGACAAGTGTGCCACCTTC |
TDP | 180,776,096 | 180,776,117 | AGGATCGCCCTCGGCGCTTTGC |
TDR | 180,776,015 | 180,776,033 | CAGCGAGGACAGGGAACAG |
PCR Primers
Primer | Sequence |
SU | GAACAAGGCAAGACTGGAGC |
SD | AGTCTTGGAGCCAACAGAGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 88 bp | + | + | - |
TDF | TDR | 125 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14518A-B6 | VGB6 | C57BL/6NTac | |
14518A-D3 | VGB6 | C57BL/6NTac | |
14518A-D11 | VGB6 | C57BL/6NTac | |
14518A-G4 | VGB6 | C57BL/6NTac | |
14518A-B2 | VGB6 | C57BL/6NTac | |