14581   Pou1f1     Status: ES cell colonies screened / QC positives

GenePou1f1
Chromosome16
Deletion Start65,520,632
Deletion End65,533,982
Deletion Size13,351
Genome Build38
MGI IDMGI:97588
NCBI Gene ID18736
BAC ID77M6
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 16

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF65,520,69165,520,709TGCCCTGCCTCTGAGAATG
TUP65,520,71265,520,734CCACAGTGCCGCTGAGTGTCTCC
TUR65,520,75865,520,779GGTCAGTACCTGTGGACATCAC
TDF65,533,80965,533,827AGCACAGCAAGCCTTCCTC
TDP65,533,82965,533,856CAGGAGATCATGCGGATGGCTGAAGAAC
TDR65,533,88365,533,900TCGGTTGCAGAACCACAC

PCR Primers

PrimerSequence
SUTTTCTGTCTTTGCCTGCTCC
SDTGAGACAAAAACTGCAGGAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR89 bp++-
TDFTDR92 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
14581A-C4VGB6C57BL/6NTac
14581B-C2VGB6C57BL/6NTac
14581C-H6VGB6C57BL/6NTac
14581C-C8VGB6C57BL/6NTac