14614   Gm5142     Status: ES cell colonies screened / QC positives

GeneGm5142
Chromosome14
Deletion Start59,178,704
Deletion End59,158,586
Deletion Size20,119
Genome Build38
MGI IDMGI:3647352
NCBI Gene ID380907
BAC ID205P11
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 14

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF59,178,60959,178,629CCCACCAGTGTTCACCTCATC
TUP59,178,58059,178,606TTCTCAGCAGACCATCTTTCATCCTGC
TUR59,178,52059,178,543GTGTTCCTCAGAGAAGGGAATGTG
TDF59,159,01759,159,039ACCAGGCCCACATTAGGACAAAG
TDP59,158,99359,159,016TCAGCAGCCACCTCTAACCTCAGA
TDR59,158,95659,158,979GGGAGCTTACATGCAGAACTCAAG

PCR Primers

PrimerSequence
SUATGGACCTAGCCCATGTGTC
SDACGGTAATTTCCCCTCAAGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR110 bp++-
TDFTDR84 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
14614A-A6VGB6C57BL/6NTac
14614A-B4VGB6C57BL/6NTac
14614A-B5VGB6C57BL/6NTac