Gene | Gspt2 |
Chromosome | X |
Deletion Start | 94,636,260 |
Deletion End | 94,638,317 |
Deletion Size | 2,058 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome X
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 94,636,430 | 94,636,449 | GCTCAACATCCACGCCAAAC |
TUP | 94,636,454 | 94,636,474 | CGTGCCTAGCGTAAGCGCAGC |
TUR | 94,636,476 | 94,636,495 | AGGAAGGACGGCACGAACTC |
TDF | 94,637,777 | 94,637,799 | TCTTCCAGGCTTCATACTTTGTG |
TDP | 94,637,802 | 94,637,828 | CCCAGTAATCTTTGCCATTCCGGACGC |
TDR | 94,637,859 | 94,637,881 | CCTGGGCAGATGATAGACTTGTG |
PCR Primers
Primer | Sequence |
SU | GACAAACCTACGGATGGCAG |
SD | CTGAAGTTTCAAACGCAACG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 66 bp | + | + | - |
TDF | TDR | 105 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14664A-F3 | VGB6 | C57BL/6NTac | |
14664A-G8 | VGB6 | C57BL/6NTac | |