14728   Retnlg     Status: ES cell colonies screened / QC positives

GeneRetnlg
Chromosome16
Deletion Start48,872,865
Deletion End48,874,406
Deletion Size1,542
Genome Build38
MGI IDMGI:2667763
NCBI Gene ID245195
BAC ID64G2
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 16

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF48,873,07848,873,097CCCTGTACCCTGGTCTAAGC
TUP48,873,10148,873,124TAGTCCTCTCCATCCCTGCCTTCC
TUR48,873,12648,873,144TGCTGAAGAAGCCCTGGTC
TDF48,874,24248,874,262TGGCTATGGCTGTGGATCTTG
TDP48,874,26748,874,294ATCCGGGATGGAAATACTTGCCACTGTC
TDR48,874,29948,874,319GTGGCCCAGTCCATTGTTGAG

PCR Primers

PrimerSequence
SUAGTTCGGCTGGTTAGAGTGG
SDACGGCTTGGAGTTCACTGTC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR67 bp++-
TDFTDR78 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
14728A-E5VGB6C57BL/6NTac
14728B-F3VGB6C57BL/6NTac