14800   Tcirg1     Status: ES cell colonies screened / QC positives

GeneTcirg1
Chromosome19
Deletion Start3,904,698
Deletion End3,896,113
Deletion Size8,586
Genome Build38
MGI IDMGI:1350931
NCBI Gene ID27060
BAC ID354L22
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 19

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF3,904,2843,904,304CCATCACAGCTCAACGAATCC
TUP3,904,2623,904,282TGAGCGCCTTCCAGAGACGCT
TUR3,904,2083,904,232CCAACTTACTAAACGTCTTCTCCAG
TDF3,896,6833,896,702TCATGCACCAAGCAATCCAC
TDP3,896,6583,896,682ACCATTGAGTTCTGCCTGGGCTGCA
TDR3,896,6233,896,641GGCCCAGAGACGCAAGTAG

PCR Primers

PrimerSequence
SUAGACAGCCTACGGTGGTAG
SDAATACAGGGCCAGTTTGCAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR97 bp++-
TDFTDR80 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
14800A-A2VGB6C57BL/6NTac
14800A-H7VGB6C57BL/6NTac
14800A-B12VGB6C57BL/6NTac
14800A-C5VGB6C57BL/6NTac
14800A-C9VGB6C57BL/6NTac
14800A-F1VGB6C57BL/6NTac