Gene | Igfbpl1 |
Chromosome | 4 |
Deletion Start | 45,826,790 |
Deletion End | 45,813,380 |
Deletion Size | 13,411 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 45,826,206 | 45,826,225 | AGCAGTGTTTCGCGTCTTTC |
TUP | 45,826,181 | 45,826,204 | ACAGCCTGCTTGCTACCTTACCCA |
TUR | 45,826,149 | 45,826,171 | CTGTTTGTTCTAGGGCTGAAGTC |
TDF | 45,813,937 | 45,813,956 | TCAGCCCTTGTCGCCTTTAG |
TDP | 45,813,912 | 45,813,936 | TGAAAGGACTGGGCAGCTCACAGTA |
TDR | 45,813,873 | 45,813,891 | CCTGCTGCTCCTGTGTCTG |
PCR Primers
Primer | Sequence |
SU | TCGATCTGGGAAAGAAATCC |
SD | GGTGGGACAAATACACAGCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 77 bp | + | + | - |
TDF | TDR | 84 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14871A-D10 | VGB6 | C57BL/6NTac | |
14871A-G8 | VGB6 | C57BL/6NTac | |
14871A-F10 | VGB6 | C57BL/6NTac | |
14871A-E7 | VGB6 | C57BL/6NTac | |