Gene | Creld2 |
Chromosome | 15 |
Deletion Start | 88,819,715 |
Deletion End | 88,826,444 |
Deletion Size | 6,730 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 15
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 88,819,912 | 88,819,930 | GGTGCCACCTCCACTACAG |
TUP | 88,819,938 | 88,819,963 | CCAACACGGCCAGGAAGAATTTCGGT |
TUR | 88,819,981 | 88,820,003 | ACTTAGACAGCGTCTTCTCTTCC |
TDF | 88,826,057 | 88,826,077 | TTGCCTGTGGTCAGTGAGATG |
TDP | 88,826,079 | 88,826,104 | CAAGGATGAGAGGACCTTTGCAGCCA |
TDR | 88,826,129 | 88,826,148 | TATGAGGTGGAGGGCAGAAG |
PCR Primers
Primer | Sequence |
SU | GAAGATTACGGTTCTGCCTC |
SD | AGCTTTGGCAGGACAGGTAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 92 bp | + | + | - |
TDF | TDR | 92 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14887A-C12 | VGB6 | C57BL/6NTac | |
14887A-H12 | VGB6 | C57BL/6NTac | |
14887A-E3 | VGB6 | C57BL/6NTac | |
14887A-H10 | VGB6 | C57BL/6NTac | |
14887A-H4 | VGB6 | C57BL/6NTac | |
14887A-E10 | VGB6 | C57BL/6NTac | |