Gene | Mpped1 |
Chromosome | 15 |
Deletion Start | 83,792,038 |
Deletion End | 83,800,179 |
Deletion Size | 8,142 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 15
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 83,792,163 | 83,792,186 | CATCATCGAGGTGGACGAATACAG |
TUP | 83,792,188 | 83,792,209 | TCCAATCCCACCCAGGCCTTCA |
TUR | 83,792,256 | 83,792,276 | CTGAGCGTCTGCACTTACATC |
TDF | 83,799,269 | 83,799,287 | TGTGAGCAAAGCCGGAAAC |
TDP | 83,799,293 | 83,799,315 | TTTCGTCCAGAACAGCTCGGCTG |
TDR | 83,799,321 | 83,799,340 | TGACCACATACAGCGCCTAC |
PCR Primers
Primer | Sequence |
SU | TCCGAGAATCTTGTTGGAGG |
SD | AAGTCAGAGTCAAGATCAGTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 114 bp | + | + | - |
TDF | TDR | 72 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14904A-C7 | VGB6 | C57BL/6NTac | |
14904A-D9 | VGB6 | C57BL/6NTac | |