14917   Ift27     Status: ES cell colonies screened / QC positives

GeneIft27
Chromosome15
Deletion Start78,173,799
Deletion End78,159,530
Deletion Size14,270
Genome Build38
MGI IDMGI:1914292
NCBI Gene ID67042
BAC ID372C3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 15

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF78,173,01978,173,039TTCCCAGATTCGCCTGACTTC
TUP78,172,98778,173,015CTGTGGGTCAGGAGTGTTGGCTACTTCTT
TUR78,172,93478,172,954GGACCCGTGAGCACAATAAAC
TDF78,160,25078,160,269GGAGGAGCCACGCATTCTTG
TDP78,160,22178,160,242CCGGCACCATCCCGGAAGTCTC
TDR78,160,17778,160,196CGGTAGGGCCGAGTGTAAAG

PCR Primers

PrimerSequence
SUTTGATGATGGTTGCCAGGAG
SDCCCTCAAGGAAGTGTGGAAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR106 bp++-
TDFTDR93 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
14917 A-A12VGB6C57BL/6NTac
14917A-F5VGB6C57BL/6NTac