Gene | Slc25a43 |
Chromosome | X |
Deletion Start | 36,743,747 |
Deletion End | 36,777,267 |
Deletion Size | 33,521 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome X
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 36,744,041 | 36,744,060 | CGGGAGATCGGACTGGAATG |
TUP | 36,744,062 | 36,744,090 | CAAAGCTGCCACCCTGATGAATCCTAAGA |
TUR | 36,744,092 | 36,744,113 | ACAGAGGAAGGGAAACTGAGAC |
TDF | 36,776,557 | 36,776,581 | TCCCGGCTATCATCTTAATTTACTC |
TDP | 36,776,582 | 36,776,610 | TGGTGTAACTCCATTGCAGAAGTTCCTTC |
TDR | 36,776,631 | 36,776,652 | GAAGCTGCCCTCAACTGAACTC |
PCR Primers
Primer | Sequence |
SU | GAAGATAGACAGGCGAAGGG |
SD | CTGTGCATGGTGCTTCTCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 73 bp | + | + | - |
TDF | TDR | 96 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
14997A-A7 | VGB6 | C57BL/6NTac | |
14997A-B9 | VGB6 | C57BL/6NTac | |
14997A-C10 | VGB6 | C57BL/6NTac | |
14997A-E9 | VGB6 | C57BL/6NTac | |
14997A-E10 | VGB6 | C57BL/6NTac | |
14997A-G6 | VGB6 | C57BL/6NTac | |