Gene | Slc35f2 |
Chromosome | 9 |
Deletion Start | 53,771,788 |
Deletion End | 53,801,133 |
Deletion Size | 29,346 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 9
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 53,772,610 | 53,772,633 | CTGCGCTTAGCCATTTATGTAGAC |
TUP | 53,772,637 | 53,772,662 | AGCACCGCATCTCCTTTGCTTTAGGA |
TUR | 53,772,690 | 53,772,709 | GCCTTGTGTTTCCTCACCTG |
TDF | 53,800,809 | 53,800,829 | TCCTCGAAGAGCTGTGTAGTC |
TDP | 53,800,831 | 53,800,853 | TCAGCTTCCCACTCGGCAAACCT |
TDR | 53,800,858 | 53,800,876 | CAGGCATCCGTGCCATCAG |
PCR Primers
Primer | Sequence |
SU | AGAAGCCCAACCCTCTCATC |
SD | ATCACGGCAGCAAGCGTAAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 100 bp | + | + | - |
TDF | TDR | 68 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15009A-D2 | VGB6 | C57BL/6NTac | |
15009A-F11 | VGB6 | C57BL/6NTac | |
15009A-H2 | VGB6 | C57BL/6NTac | |