Gene | Slc41a2 |
Chromosome | 10 |
Deletion Start | 83,316,606 |
Deletion End | 83,297,158 |
Deletion Size | 19,449 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 83,316,175 | 83,316,198 | AGCGAGGGCGATGATGTTATTGTG |
TUP | 83,316,144 | 83,316,170 | CAAGCCAGAGGATTCCAAAGGAGTCCA |
TUR | 83,316,093 | 83,316,113 | CAAACCCAGCCAGCAAGAATG |
TDF | 83,297,242 | 83,297,263 | GACTGGCATAAACCCTGACAAC |
TDP | 83,297,220 | 83,297,240 | TGGCCACACCCATTGCTGCTA |
TDR | 83,297,166 | 83,297,187 | ACAAACCCTGACTTATCCAAGC |
PCR Primers
Primer | Sequence |
SU | ATGTCACAGAACAGATCTGTG |
SD | TGTCTGAGGCTGCATGACAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 106 bp | + | + | - |
TDF | TDR | 98 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15021A-F1 | VGB6 | C57BL/6NTac | |
15021A-H9 | VGB6 | C57BL/6NTac | |
15021A-H7 | VGB6 | C57BL/6NTac | |
15021A-D7 | VGB6 | C57BL/6NTac | |