Gene | Abcg2 |
Chromosome | 6 |
Deletion Start | 58,655,660 |
Deletion End | 58,692,433 |
Deletion Size | 36,774 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 6
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 58,655,721 | 58,655,742 | GGATGAACTCCAGAGCCGTTAG |
TUP | 58,655,744 | 58,655,768 | ACGCTCGCAGAAGGAGATGTGTTGA |
TUR | 58,655,798 | 58,655,820 | CGGACTAGAAACCCACTCTTTAC |
TDF | 58,691,445 | 58,691,465 | TGCCCACTTCACTTGCGTTTG |
TDP | 58,691,468 | 58,691,491 | CTGGGTGTGGCATCTTTCCCTTCC |
TDR | 58,691,520 | 58,691,541 | GTACCACTTCTCCTGTCCACTC |
PCR Primers
Primer | Sequence |
SU | AAGCTAATGGGAGCAGAGGC |
SD | AGACTATTCAAGTACCACTCTCCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 100 bp | + | + | - |
TDF | TDR | 97 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15075A-E4 | VGB6 | C57BL/6NTac | |
15075A-H5 | VGB6 | C57BL/6NTac | |
15075A-H9 | VGB6 | C57BL/6NTac | |
15075A-A5 | VGB6 | C57BL/6NTac | |