15092   Uncx     Status: ES cell colonies screened / QC positives

GeneUncx
Chromosome5
Deletion Start139,543,997
Deletion End139,547,792
Deletion Size3,796
Genome Build38
MGI IDMGI:108013
NCBI Gene ID22255
BAC ID46K6
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 5

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF139,544,536139,544,556AGCTGGAGAAGGCGTTCAATG
TUP139,544,559139,544,584AGCCACTACCCGGACGTGTTTATGCG
TUR139,544,636139,544,653CCTTGGGCGACACCAATC
TDF139,547,300139,547,321CAAGGGCCACTTCTTGCTCTAC
TDP139,547,336139,547,359CCTGGGTTTCCTAGTGCCACAGGC
TDR139,547,383139,547,403CGTCCTTGGGCACCAATTCAG

PCR Primers

PrimerSequence
SUTTATGGAGGTGCGTGTCAGG
SDTTGGTCCCCATCGACACAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR118 bp++-
TDFTDR104 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
15092A-F10VGB6C57BL/6NTac
15092A-B11VGB6C57BL/6NTac