15119   Vipr1     Status: ES cell colonies screened / QC positives

GeneVipr1
Chromosome9
Deletion Start121,642,852
Deletion End121,669,612
Deletion Size26,761
Genome Build38
MGI IDMGI:109272
NCBI Gene ID22354
BAC ID382M15
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 9

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF121,643,660121,643,679CCAGCCACACTTGGACAGAG
TUP121,643,681121,643,707TGATCTTCCCTTCCCTTGCTCTAGGTC
TUR121,643,739121,643,762TGTTCCAGACCAGAATCCACTAAG
TDF121,668,732121,668,751TTTGCCTCACCTCCTCTTCC
TDP121,668,762121,668,785TTTGTGGTGGCCATCCTCTACTGC
TDR121,668,791121,668,809GGCACTCACCTCGCCATTG

PCR Primers

PrimerSequence
SUTGTGGCCCTTCTAGTCCAAG
SDGAGCTGGCAGATAAACGGAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR103 bp++-
TDFTDR78 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
15119A-G3VGB6C57BL/6NTac
15119E-A7VGB6C57BL/6NTac