15187   Reg3d     Status: ES cell colonies screened / QC positives

GeneReg3d
Chromosome6
Deletion Start78,378,503
Deletion End78,376,007
Deletion Size2,497
Genome Build38
MGI IDMGI:1353426
NCBI Gene ID30053
BAC ID242E22
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 6

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF78,378,46278,378,481GCATGTCCTGGATGCTACTG
TUP78,378,43578,378,461TGTTGCCTGATGTCCCTTTCTTGGGTA
TUR78,378,40978,378,431GCTAGACACACAACAACTTTACC
TDF78,376,46378,376,486TCTGACCCTCTGACCTTCTATAAC
TDP78,376,43778,376,462TGGGAGATACCACCCTCCATGTCTGC
TDR78,376,40578,376,427CCTGAGACAAAGCTGCACAGTAG

PCR Primers

PrimerSequence
SUAGGAGCTGGCACTTCTTCAC
SDGGCAATGCCTTCATTTGTTC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR73 bp++-
TDFTDR82 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
15187A-A10VGB6C57BL/6NTac
15187A-G4VGB6C57BL/6NTac