15225   Tnfsf11     Status: ES cell colonies screened / QC positives

GeneTnfsf11
Chromosome14
Deletion Start78,307,886
Deletion End78,278,476
Deletion Size29,411
Genome Build38
MGI IDMGI:1100089
NCBI Gene ID21943
BAC ID214J15
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 14

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF78,307,51178,307,534CCAGCCAAGCTCATCTCCTATCAG
TUP78,307,48878,307,510CGCAGCGTGCAGAAGCTGAACTC
TUR78,307,46478,307,486CAAACCCATCCTCAGCCAGAATC
TDF78,278,65678,278,680CGAGCTGGTGAAGAAATTAGCATTC
TDP78,278,63178,278,652TGTCCAACCCTTCCCTGCTGGA
TDR78,278,57078,278,593TGAGTCTCAGTCTATGTCCTGAAC

PCR Primers

PrimerSequence
SUAAAGGAAGGAGGGCAGATGT
SDGCAATGACATGGCATCCTC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR71 bp++-
TDFTDR111 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
15225A-F3VGB6C57BL/6NTac
15225A-C1VGB6C57BL/6NTac