Gene | Lrp6 |
Chromosome | 6 |
Deletion Start | 134,542,040 |
Deletion End | 134,513,229 |
Deletion Size | 28,812 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 6
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 134,541,944 | 134,541,965 | GTAGTTGGAGGCTTGGAGGATG |
TUP | 134,541,908 | 134,541,934 | TGGACTTTGTGTTTGGTCATGGCTTGA |
TUR | 134,541,871 | 134,541,893 | CGTTTAATGGCTTCTTCGCTGAC |
TDF | 134,513,672 | 134,513,689 | GGGAGGCTGACAGCAATG |
TDP | 134,513,641 | 134,513,669 | AAGAGATTTGGGCTTCTGTGTCTTGTGAC |
TDR | 134,513,612 | 134,513,631 | GGTCCCTGCCTTGGAAGTAG |
PCR Primers
Primer | Sequence |
SU | TCTCAATAAGAAAAGACAGACAG |
SD | AACAGCAGATGAGCTGTCTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 95 bp | + | + | - |
TDF | TDR | 78 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15249B-F11 | VGB6 | C57BL/6NTac | |