15322   Arfgap1     Status: ES cell colonies screened / QC positives

GeneArfgap1
Chromosome2
Deletion Start180,981,453
Deletion End180,971,058
Deletion Size10,396
Genome Build38
MGI IDMGI:2183559
NCBI Gene ID228998
BAC ID359G20
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 2

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF180,971,060180,971,079CAGCCCAAGAACCAGGAAAG
TUP180,971,081180,971,104TCTTAAGGAAGTCCGGGCACAGGA
TUR180,971,126180,971,144GACGCTCATCAGCCCAAAG
TDF180,981,347180,981,364GGCTGGGACAACCAGAAC
TDP180,981,365180,981,388TGGTAGGAGCCTAGCACCCTAGCC
TDR180,981,416180,981,439AGGAGGAACAAGAAGGGCAAAGTG

PCR Primers

PrimerSequence
SUCTGGGAGAGAGGAAGTGCAG
SDGCTGTGGACTTAGGTGAGGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR85 bp++-
TDFTDR93 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
15322A-B8VGB6C57BL/6NTac
15322A-B9VGB6C57BL/6NTac
15322A-C8VGB6C57BL/6NTac
15322A-G7VGB6C57BL/6NTac
15322A-G12VGB6C57BL/6NTac