Gene | Kcnmb2 |
Chromosome | 3 |
Deletion Start | 32,182,022 |
Deletion End | 32,156,117 |
Deletion Size | 25,906 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 3
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 32,156,206 | 32,156,229 | ATGGAACACTGATGGAACAAGATG |
TUP | 32,156,231 | 32,156,254 | TGGCTGCTCTCCTTGTCACTGTGA |
TUR | 32,156,269 | 32,156,290 | AAGCCCTCCCTTTCCTAAGTTG |
TDF | 32,181,795 | 32,181,816 | TCCTGTCCTGTGCTCATTCTTG |
TDP | 32,181,818 | 32,181,841 | CCCTTCTCTGCAGCGTGTGGACAG |
TDR | 32,181,850 | 32,181,868 | CATTCAGCAGGGCACACTG |
PCR Primers
Primer | Sequence |
SU | AAGGAGGAATGCACATTTCTG |
SD | CTGTGCTTGCTTTGACAGAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 85 bp | + | + | - |
TDF | TDR | 74 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15325A-A3 | VGB6 | C57BL/6NTac | |
15325A-C5 | VGB6 | C57BL/6NTac | |
15325A-D3 | VGB6 | C57BL/6NTac | |
15325A-B10 | VGB6 | C57BL/6NTac | |