15353   Ambp     Status: ES cell colonies screened / QC positives

GeneAmbp
Chromosome4
Deletion Start63,154,052
Deletion End63,143,367
Deletion Size10,686
Genome Build38
MGI IDMGI:88002
NCBI Gene ID11699
BAC ID420O19
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 4

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF63,153,69463,153,714AAGCCTAGTGCCTTCCAAATC
TUP63,153,67363,153,693TGCGCTGTCCTCATGGGTCCC
TUR63,153,63463,153,653TGTCCACCCTATGCCACCTG
TDF63,143,90163,143,920CCCTGGCCCTGTCTATTGTC
TDP63,143,87663,143,897TGCATGTCCCAACAGCAGGTGC
TDR63,143,83563,143,853AGGCCGCTGTGGAGGAAAG

PCR Primers

PrimerSequence
SUGGAGAGTCTTGGGAGGAAGG
SDGGGACTGTTGTGTTTGAAATG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR81 bp++-
TDFTDR86 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
15353A-D1VGB6C57BL/6NTac
15353A-A11VGB6C57BL/6NTac
15353A-B7VGB6C57BL/6NTac
15353A-G11VGB6C57BL/6NTac
15353A-E11VGB6C57BL/6NTac
15353A-G3VGB6C57BL/6NTac