Gene | Egr4 |
Chromosome | 6 |
Deletion Start | 85,513,394 |
Deletion End | 85,511,559 |
Deletion Size | 1,836 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 6
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 85,512,809 | 85,512,830 | AGCTTCTTCATCCAGGCGGTTC |
TUP | 85,512,787 | 85,512,805 | AACACCCGCACGACCCGGA |
TUR | 85,512,750 | 85,512,768 | CAGGCCCAAGATGCCAGAC |
TDF | 85,512,363 | 85,512,384 | AGTAGGGACCAAGGTCGAGGAC |
TDP | 85,512,336 | 85,512,355 | CCATCAGCTGCCCCGCCGAG |
TDR | 85,512,275 | 85,512,293 | GGGCCAACGAGAAGGTGTC |
PCR Primers
Primer | Sequence |
SU | GCATACATCCTGTGTCCATG |
SD | TGCTTGAGAGTAGCGTCTGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 81 bp | + | + | - |
TDF | TDR | 110 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15415A-H10 | VGB6 | C57BL/6NTac | |
15415A-F12 | VGB6 | C57BL/6NTac | |