Gene | Art5 |
Chromosome | 7 |
Deletion Start | 102,099,490 |
Deletion End | 102,097,020 |
Deletion Size | 2,471 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 102,098,766 | 102,098,790 | GCAATTATCCTCATGCTCTCCTCAC |
TUP | 102,098,742 | 102,098,763 | CCCTGTGAGGCTGGAAGCATCC |
TUR | 102,098,698 | 102,098,719 | CTGGCTCTGGGATCTGGACTTC |
TDF | 102,097,273 | 102,097,294 | CAGCCTGCTCTGAGACTTGTTC |
TDP | 102,097,250 | 102,097,271 | AGCTTCACTGGCCCTGCTGCCC |
TDR | 102,097,212 | 102,097,230 | GCCCGACTGCTGGAGAAAG |
PCR Primers
Primer | Sequence |
SU | CGCAAAGAAGTCCTGGAGAC |
SD | GAAGCAGGAGACCTGAGTGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 93 bp | + | + | - |
TDF | TDR | 83 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15460A-A7 | VGB6 | C57BL/6NTac | |
15460A-H7 | VGB6 | C57BL/6NTac | |
15460A-E8 | VGB6 | C57BL/6NTac | |
15460A-G7 | VGB6 | C57BL/6NTac | |
15460A-E3 | VGB6 | C57BL/6NTac | |