15505   Casp12     Status: ES cell colonies screened / QC no positives

GeneCasp12
Chromosome9
Deletion Start5,358,854
Deletion End5,345,522
Deletion Size13,333
Genome Build38
MGI IDMGI:1312922
NCBI Gene ID12364
BAC ID38B19
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableNo

Primer Genomic Coordinates on Chromosome 9

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF5,345,6085,345,630GCAGAGCTGTTTGTAAGTTGAGG
TUP5,345,6375,345,664AGGCTATGGTAGCACATGTTGAAGCAGA
TUR5,345,6785,345,701GCTGAGGATAAATGCCTTTGAGAG
TDF5,358,1245,358,148GAGGTCTTTGCTTTACTCTCCTTTG
TDP5,358,1505,358,178CCTCCTTTCTTCTGTGAAGCACCCAATCA
TDR5,358,1855,358,205TGGGCATGACAGTTTAGGAAC

PCR Primers

PrimerSequence
SUCAAGTGTCACGGTCTCATGG
SDAGAGAGGGTTGTACTTTCATC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR94 bp++-
TDFTDR82 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++