15505 Casp12 Status: ES cell colonies screened / QC no positives
Gene | Casp12 |
Chromosome | 9 |
Deletion Start | 5,358,854 |
Deletion End | 5,345,522 |
Deletion Size | 13,333 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 9
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 5,345,608 | 5,345,630 | GCAGAGCTGTTTGTAAGTTGAGG |
TUP | 5,345,637 | 5,345,664 | AGGCTATGGTAGCACATGTTGAAGCAGA |
TUR | 5,345,678 | 5,345,701 | GCTGAGGATAAATGCCTTTGAGAG |
TDF | 5,358,124 | 5,358,148 | GAGGTCTTTGCTTTACTCTCCTTTG |
TDP | 5,358,150 | 5,358,178 | CCTCCTTTCTTCTGTGAAGCACCCAATCA |
TDR | 5,358,185 | 5,358,205 | TGGGCATGACAGTTTAGGAAC |
PCR Primers
Primer | Sequence |
SU | CAAGTGTCACGGTCTCATGG |
SD | AGAGAGGGTTGTACTTTCATC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 94 bp | + | + | - |
TDF | TDR | 82 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |