15563   Pcnt     Status: ES cell colonies screened / QC positives

GenePcnt
Chromosome10
Deletion Start76,442,615
Deletion End76,418,364
Deletion Size24,252
Genome Build38
MGI IDMGI:102722
NCBI Gene ID18541
BAC ID155K15
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 10

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF76,442,35576,442,373TCGCTCCGCCCTATTACAC
TUP76,442,33076,442,354CCACAGCCAATCAGCGTCAGAGACG
TUR76,442,25476,442,275CACCGGAAGCACAACAACTAAG
TDF76,418,59176,418,611AGGATATGCACAGGCTTGACC
TDP76,418,56576,418,589CTGTGGGAACTCTGTCTCAGCAGCA
TDR76,418,52576,418,543CAGCAGGTGCCCTTCATTG

PCR Primers

PrimerSequence
SUGTGTTCGCAGAAACACATCG
SDGGACGAGTGAGGGAAAACTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR120 bp++-
TDFTDR87 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
15563A-B4VGB6C57BL/6NTac
15563A-E8VGB6C57BL/6NTac
15563A-A8VGB6C57BL/6NTac
15563A-E10VGB6C57BL/6NTac